- Novel dibenzosuberene substituted aroyl selenoureas: Synthesis, crystal structure, DFT, molecular docking and biological studies
-
A series of aroyl selenourea dibenzosuberene (1–3) derivatives were synthesized and characterized by different analytical methods and single crystal X-ray crystallography. Quantum chemical computations were made using DFT to determine the structural and molecular properties of the compounds. The in?vitro antibacterial action of the compounds was evaluated against chosen gram-negative (Pseudomonas aeruginosa, Klebsiella pneumoniae, and Escherichia coli), and gram-positive (Bacillus subtilis, Staphylococcus aureus, and Staphylococcus epidermidis) bacteria for their antifungal activity against Curvularia lunata, Penicillium notatum, and Aspergillus niger. Using molecular docking studies, the binding modes were understood along with the mechanism in opposing the target protein MurB.
- Musthafa, Moideen,Konakanchi, Ramaiah,Ganguly, Rakesh,Sreekanth, Anandaram
-
-
Read Online
- A Compact and Synthetically Accessible Fluorine-18 Labelled Cyclooctyne Prosthetic Group for Labelling of Biomolecules by Copper-Free Click Chemistry
-
A new fluorine-containing azadibenzocyclooctyne (ADIBO-F) was designed using a synthetically accessible pathway. The fluorine-18 prosthetic group was prepared from its toluenesulfonate precursor and isolated in 21–35 % radiochemical yield in 30 minutes of synthetic time. ADIBO-F has been incorporated into azide-functionalized, cancer-targeting peptides through a strain-promoted alkyne–azide cycloaddition with high radiochemical yields and purities. The final products are novel peptide-based positron emission tomography (PET) imaging agents that possess high affinities for their targets, growth hormone secretagogue receptor 1a (GHSR-1a) and gastrin-releasing peptide receptor (GRPR), with IC50 values of 9.7 and 0.50 nm, respectively. This is a new and rapid labelling option for the incorporation of fluorine-18 into biomolecules for PET imaging.
- Murrell, Emily,Kovacs, Michael S.,Luyt, Leonard G.
-
-
Read Online
- Highly Efficient Multigram Synthesis of Dibenzoazacyclooctyne (DBCO) without Chromatography
-
The synthesis of 4-[11,12-didehydrodibenzo[b,f]azocin-5(6H)-yl]-4-oxobutanoic acid, also known as dibenzoazacyclooctyne (DBCO) or aza-dibenzocyclooctyne (ADIBO), was optimized for large-scale preparations of at least 10 g with an overall yield of 42%.
- McNelles, Stuart A.,Pantaleo, Julia L.,Adronov, Alex
-
-
Read Online
- A novel metal-free synthesis of 6H-isoindolo[2,1-α]indol-6-one
-
6 H -Isoindolo[2,1- α]indol-6-one, a core structure for a number of biologically active compounds, was synthesized in four steps. The approach is metal-free and uses a Beckmann rearrangement followed by an intramolecular cyclization.
- Dai, Chaofeng,Draganov, Alexander B.,Wang, Binghe
-
-
Read Online
- A two-step strategy to radiolabel choline phospholipids with99mTc in S180 cell membranes via strain-promoted cyclooctyne–azide cycloaddition reaction
-
As tumor markers, the radiolabeling of choline (Cho)-containing phospholipids in cellular membranes with99mTc is a challenge. The conventional strategy to combine the metallic radionuclide with Cho by large ligand damages the bioactivity of Cho, resulting in low tumor-to-nontumor ratios. Pretargeting strategy based on strain-promoted cyclooctyne–azide cycloaddition (SPAAC) reaction was applied to solve this general problem. Functional click synthons were synthesized as pretargeting components: azidoethyl-choline (AECho) serves as tumor marker and azadibenzocyclooctyne (ADIBO) conjugated to bis(2-pieolyl) amine (BPA) ligand (ADIBO-BPA) as99mTc(CO)3-labeling and azido-binding group. Both in vitro cell experiment and in vivo biodistribution experiment indicate that it is versatile to radiolabel Cho in cellular membranes via this two-step pretargeting strategy. We believe that this pretargeting strategy can indeed enhance the target-specificity and also reduce background signals to optimize imaging quality.
- Chen, Qingxin,Chu, Taiwei
-
-
Read Online
- Access to Cyanoimines Enabled by Dual Photoredox/Copper-Catalyzed Cyanation of O-Acyl Oximes
-
An efficient strategy for the synthesis of pharmaceutically important and synthetically useful cyanoimines, as well as cyanamides, has been described. This strategy is enabled by dual photoredox/copper-catalyzed cyanation of O-acyl oximes or O-acyl hydroxamides. This state of the art protocol for cyanoimines and cyanamides features readily available starting materials, mild reaction conditions, good functional group tolerance, and operational simplicity. The resultant cyanoimines can be transformed into structurally diverse and functionally important N-containing heterocycles.
- Wei, Ziyan,Yu, Shouyun,Zhang, Ai Hua,Zhang, Hao
-
supporting information
p. 7315 - 7320
(2020/10/02)
-
- Manipulating the Click Reactivity of Dibenzoazacyclooctynes: From Azide Click Component to Caged Acylation Reagent by Silver Catalysis
-
Strain-promoted azide–alkyne cycloaddition using dibenzoazacyclooctyne (DBCO) is widely applied in copper-free bioorthogonal reactions. Reported here is the efficient acid-promoted rearrangement and silver-catalyzed amidation of DBCO, which alters its click reactivity robustly. In the switched click reaction, DBCO, as a caged acylation reagent, enables rapid peptide/protein modification after decaging facilitated by silver catalysts, rendering site-specific conjugation of an IgG antibody by a Fc-targeting peptide.
- Ao, Jiwei,Huang, He,Huang, Wei,Jiang, Bofeng,Liu, Junjie,Ren, Xuelian,Shi, Wei,Tang, Feng,Tang, Yubo,Yang, Weibo,Yu, Qun
-
supporting information
p. 19940 - 19944
(2020/09/02)
-
- STEROIDS AND PROTEIN-CONJUGATES THEREOF
-
Described herein protein steroid conjugates that are useful, for example, for the target-specific delivery of glucocorticoids (GCs) to cells.
- -
-
Paragraph 0630; 0632
(2018/05/27)
-
- BIOMOLECULE CONJUGATES
-
The present invention relates to biomolecule conjugates which comprise a biomolecule wherein at least one non-natural amino acid (NNAA) is integral to the structure of the biomolecule and wherein the NNAA is a point of attachment of a linker to which a payload, particularly a cytotoxic agent, is attached. More specifically, this invention relates to conjugates of cell-binding agents and active release products comprising cytotoxic agents wherein the conjugates are produced by means of a cycloaddition reaction. Methods of production, pharmaceutical compositions and methods of use are provided.
- -
-
Page/Page column 86
(2016/06/28)
-
- Aza dibenzo link octyne compound and method for preparing the same
-
The invention discloses a heterocyclic nitrogen-dibenz-cyclooctyne class compound and a preparation method of the heterocyclic nitrogen-dibenz-cyclooctyne class compound, and belongs to the field of organic chemical synthesis. The structural general formula of the compound is shown in the formula I. 5-dibenz cycloheptene ketene serves as a starting material, final end product heterocyclic nitrogen-dibenz-cyclooctyne hydrochloride is obtained through the reactions of oximation, Beckmann rearrangement, amid reduction, protection, addition, debromination, deprotection and the like, and the total yield is higher than 73.6%. The raw material is easy to obtain, after-treatment is convenient and easy to operate, and the total yield is high. The heterocyclic nitrogen-dibenz-cyclooctyne class compound without a substituent on nitrogen atoms is synthezied for the first time, a novel method can be provided for synthesizing a heterocyclic nitrogen-dibenz-cyclooctyne class compound with different substituents on the nitrogen atoms, especially for synthesizing multiple heterocyclic nitrogen-dibenz-cyclooctyne class compounds with the different substituents on the nitrogen atoms, wherein the heterocyclic nitrogen-dibenz-cyclooctyne class compounds are not easy to prepare through other methods, a product of the heterocyclic nitrogen-dibenz-cyclooctyne class compound can serve as the raw material, and H on nitrogen is replaced by the needed R base.
- -
-
Paragraph 0057; 0058; 0059; 0060
(2017/02/02)
-
- Strain-promoted azide-alkyne cycloaddition with ruthenium(II)-azido complexes
-
The reactivity of an exemplary ruthenium(II)-azido complex towards non-activated, electron-deficient, and towards strain-activated alkynes at room temperature and low millimolar azide and alkyne concentrations has been investigated. Non-activated terminal and internal alkynes failed to react under such conditions, even under copper(I) catalysis conditions. In contrast, as expected, rapid cycloaddition was observed with electron-deficient dimethyl acetylenedicarboxylate (DMAD) as the dipolarophile. Since DMAD and related propargylic esters are excellent Michael acceptors and thus unsuitable for biological applications, we investigated the reactivity of the azido complex towards cycloaddition with derivatives of cyclooctyne (OCT), bicyclo[6.1.0]non-4-yne (BCN), and azadibenzocyclooctyne (ADIBO). While no reaction could be observed in the case of the less strained cyclooctyne OCT, the highly strained cyclooctynes BCN and ADIBO readily reacted with the azido complex, providing the corresponding stable triazolato complexes, which were amenable to purification by conventional silica gel column chromatography. An X-ray crystal structure of an ADIBO cycloadduct was obtained and verified that the formed 1,2,3-triazolato ligand coordinates the metal center through the central N2 atom. Importantly, the determined second-order rate constant for the ADIBO cycloaddition with the azido complex (k2=6.9 × 10 -2 M-1 s-1) is comparable to the rate determined for the ADIBO cycloaddition with organic benzyl azide (k 2=4.0 × 10-1 M-1 s-1). Our results demonstrate that it is possible to transfer the concept of strain-promoted azide-alkyne cycloaddition (SPAAC) from purely organic azides to metal-coordinated azido ligands. The favorable reaction kinetics for the ADIBO-azido-ligand cycloaddition and the well-proven bioorthogonality of strain-activated alkynes should pave the way for applications in living biological systems.
- Cruchter, Thomas,Harms, Klaus,Meggers, Eric
-
supporting information
p. 16682 - 16689
(2014/01/06)
-
- Strain-promoted "click" modification of a mesoporous metal-organic framework
-
Strain-promoted "click" chemistry is used to post-synthetically modify the pore walls of azide-functionalized mesoporous bio-MOF-100 (N 3-bio-MOF-100). The reactions proceed in high yield and produce no byproduct. This new method was used to introduce various functional groups into the MOF mesopores, including succinimidyl ester bioconjugation moieties that allow for straightforward coupling of biomolecules to the pore walls.
- Liu, Chong,Li, Tao,Rosi, Nathaniel L.
-
supporting information
p. 18886 - 18888
(2013/01/15)
-
- AZA-DIBENZOCYCLOOCTYNES AND METHODS OF MAKING AND USING SAME
-
Convenient methods of preparing aza-dibenzocyclooctynes are disclosed herein. Aza-dibenzocyclooctynes attached to a surface are also disclosed herein. Aza-dibenzocyclooctynes can be reacted with azides to form heterocyclic compounds. Such reactions can be useful in a wide variety of applications including, for example, labeling surfaces.
- -
-
Page/Page column 6
(2012/02/06)
-
- Strain-promoted copper-free "click" chemistry for 18F radiolabeling of bombesin
-
Click for PET: The GRP-receptor-specific peptide bombesin, which is often used for nuclear imaging of tumors, can be labeled with 18F in a mild and rapid manner by using a copper-free azide-alkyne "click" reaction. A range of azides can be used to provide peptides with different hydrophobicities. The resulting 18F radiopharmaceutical tracers (see scheme) maintain their high affinity for the targeted receptor in vitro in human prostate cancer cells. Copyright
- Campbell-Verduyn, Lachlan S.,Mirfeizi, Leila,Schoonen, Anne K.,Dierckx, Rudi A.,Elsinga, Philip H.,Feringa, Ben L.
-
supporting information; experimental part
p. 11117 - 11120
(2012/02/02)
-
- Copper-free click for PET: Rapid 1,3-dipolar cycloadditions with a fluorine-18 cyclooctyne
-
The strain-promoted click 1,3-dipolar cycloaddition reactions involving azides and cyclooctynes for the synthesis of triazoles offer the advantage of being able to be performed in biological settings via copper-free chemistries. While strained reagents conjugated to optical dyes and radiometal conjugates have been reported, cyclooctyne reagents labeled with fluorine-18 ( 18F) and radiochemically evaluated in a copper-free click reaction have yet to be explored. This report describes the conversion of a bifunctional azadibenzocyclooctyne (ADIBO) amine to the 18F-labeled cyclooctyne 4, the subsequent fast copper-free 1,3-dipolar cycloaddition reaction with alkyl azides at 37 °C (>70% radiochemical conversion in 30 min), and biological evaluations (serum stability of >95% at 2 h). These findings demonstrate the excellent reactivity of the 18F-labeled cyclooctyne 4 with readily available azides that will allow future work focusing on rapid copper-free in vitro and in vivo click chemistries for PET imaging using 18F-labeled cyclooctyne derivatives of ADIBO.
- Carpenter, Richard D.,Hausner, Sven H.,Sutcliffe, Julie L.
-
supporting information; scheme or table
p. 885 - 889
(2012/02/01)
-
- Surface functionalization using catalyst-free azide-alkyne cycloaddition
-
The utility of catalyst-free azide-alkyne [3 + 2] cycloaddition for the immobilization of a variety of molecules onto a solid surface and microbeads was demonstrated. In this process, the surfaces are derivatized with aza-dibenzocyclooctyne (ADIBO) for the immobilization of azide-tagged substrates via a copper-free click reaction. Alternatively, ADIBO-conjugated molecules are anchored to the azide-derivatized surface. Both immobilization techniques work well in aqueous solutions and show excellent kinetics under ambient conditions. We report an efficient synthesis of aza-dibenzocyclooctyne (ADIBO), thus far the most reactive cyclooctyne in cycloaddition to azides. We also describe convenient methods for the conjugation of ADIBO with a variety of molecules directly or via a PEG linker.
- Kuzmin, Alexander,Poloukhtine, Andrei,Wolfert, Margreet A.,Popik, Vladimir V.
-
experimental part
p. 2076 - 2085
(2011/07/09)
-