T.-H. Tseng et al. / Tetrahedron 66 (2010) 1335–1340
1339
4.6. 2-(4-Hydroxy-2-methoxyphenyl)-5-hydroxy-
4.9. 2-(2,4-Dihydroxyphenyl)-5-hydroxy-8,8-dimethyl-3-
(3-methyl-but-2-enyl)-pyrano[2,3-f]chromen-4-one (1)28
8,8-dimethyl-3-(3-methyl-but-2-enyl)-pyrano[2,3-f]chromen-
4-one (9b)27
To a solution of 10a (0.30 g, 0.6 mmol) in pyridine (4.0 mL) was
added acetyl chloride (39 L) with dropwise at room temperature,
Compound 9b as yellow powder: mp 195–197 ꢂC (lit.27 mp 198–
199 ꢂC), IR (KBr) nmax: 3400, 2975, 2928, 1650, 1620, 1580, 1265,
m
and followed by stirring for 1 h. The resulting reaction mixture was
quenched with H2O (0.2 mL) and extracted with CH2Cl2 (3ꢁ5.0 mL).
The combined organic extracts were dried over Na2SO4, and con-
centrated in vacuo. The residue was purified by flash column
chromatography (SiO2, hexane:ethyl acetate 3:1) to obtain the
desired product (0.30 g, 92%) as an oil. Subsequently, a mixture of
acetoxy product and SnCl2 (0.11 g, 0.6 mmol) in acetonitrile
(5.0 mL) was added EtSH (0.2 mL) at room temperature under N2,
and monitored by TLC. The solvent was removed and the residue
was subjected to column chromatography (SiO2, ether:hexane 1:1)
to give the demethoxybenzyl acetoxy product isomers, which was
dissolved in THF (5.0 mL), and followed by deacetylation with
1184, 850 cmꢀ1, 1H NMR [(CD3)2CO]
d 1.38 (s, 3H), 1.42 (s, 6H), 1.55
(s, 3H), 3.02 (d, J¼3.3 Hz, 2H), 3.80 (s, 3H), 5.06 (t, J¼3.3 Hz, 1H),
5.62 (d, J¼5.1 Hz, 1H), 6.14 (s, 1H), 6.54 (d, J¼5.1 Hz, 1H), 6.58 (dd,
J¼5.1, 1.2 Hz, 1H), 6.64 (d, J¼1.2 Hz, 1H), 7.27 (d, J¼5.1 Hz, 1H), 9.09
(br s, 1H), 13.2 (br s, 1H); 13C NMR [(CD3)2CO]
d 16.7, 23.7, 24.9, 27.3,
27.3, 55.1, 77.8, 98.9, 99.2, 100.7, 104.6, 107.3, 113.1, 114.4, 120.8,
121.5, 127.2, 131.2, 131.4, 152.3, 158.7, 159.1, 161.0, 161.4, 161.8, 182.2,
HRMS (EI) calcd for C26H26O6 (Mþ) 434.1729, found 434.1723.
4.7. 2-[2-(4-Methoxybenzyloxy)-4-hydroxyphenyl]-
5-hydroxy-8,8-dimethyl-3-(3-methyl-but-2-enyl)-pyrano
[2,3-f]chromen-4-one (10a)
NH2NH2–H2O (29 mL, 0.6 mmol) at room temperature. The mixture
was stirred for 20 min, and the resulting solution was diluted with
CH2Cl2 and filtered by silica gel. The organic solvent was concen-
trated in vacuo, and the residue was purified by flash column
chromatography (SiO2, ether:CH2Cl2 1:20) to achieve 1 (156 mg,
67%) as light yellow solid: mp 149–150 ꢂC (ether/hexane) (lit.29
147–149 ꢂC), IR (KBr) nmax: 3400, 2978, 2928, 1648, 1620, 1580,
The mixture of 9a (2.10 g, 4.8 mmol) and K2CO3 (3.00 g,
21.7 mmol) in acetone (50.0 mL) was added PMBBr (0.5 mL,
5.3 mmol) at room temperature, and then refluxed at 70 ꢂC for 1 h by
TLC monitoring. After cooling, the solution was evaporated in vacuo,
and the brown residue was subjected to flash chromatography (SiO2,
hexane:ethyl acetate 4:1) togive the protected product (2.39 g, 89%).
Subsequently, the protected product was treated by adding a solu-
tion of EtSLi in HMPA (6.0 mL) at room temperature, and the
resulting mixture was heated at 70 ꢂC under N2. After stirring at
70 ꢂC for 2 h, the reaction mixture was cooled and quenched with
a saturated solution of NH4Cl (4.0 mL) and extracted with ethyl ac-
etate (3ꢁ20 mL). The combined organic extracts were washed with
saturated aqueous LiCl, dried over Na2SO4, and concentrated in
vacuo. The residue was purified by flash column chromatography
(SiO2, hexane:ethyl acetate 3:1) to afford 10a (1.70 g, 73%) as an oil:
IR (KBr) nmax: 3400, 2972, 2932, 1654, 1620, 1580, 1265, 1184, 850,
1265, 1184, 790 cmꢀ1, 1H NMR [(CD3)2CO]
d 1.42 (s, 9H), 1.55 (s, 3H),
3.10 (d, J¼6.9 Hz, 2H), 4.55 (br s,1H), 4.58 (br s,1H), 5.11 (t, J¼6.9 Hz,
1H), 5.63 (d, J¼8.1 Hz, 1H), 6.13 (s, 1H), 6.50 (dd, J¼9.6, 2.4 Hz, 1H),
6.55 (d, J¼2.4 Hz, 1H), 6.58 (d, J¼9.6 Hz, 1H), 7.23 (d, J¼8.1 Hz, 1H),
13.2 (br s, 1H); 13C NMR
d 17.6, 24.2, 25.6, 28.1, 28.1, 78.1, 99.8, 101.0,
103.8, 104.9, 108.3, 112.3, 114.7, 120.8, 121.3, 127.1, 131.6, 133.2, 152.1,
155.2, 159.2, 159.3, 159.9, 161.2, 182.3, HRMS (EI) calcd for C25H24O6
(Mþ) 420.1573, found 420.1566.
4.10. Computational methods. Preparation of ligand and
protein complexes input structures
780 cmꢀ1, 1H NMR
d 1.41 (s, 3H), 1.46 (s, 6H), 1.59 (s, 3H), 3.09 (d,
J¼5.4 Hz, 2H), 3.75 (s, 3H), 4.99 (s, 2H), 5.11 (t, J¼5.4 Hz,1H), 5.48 (d,
J¼8.1 Hz, 1H), 6.26 (s, 1H), 6.53 (dd, J¼9.9, 2.1 Hz, 1H), 6.60 (d,
J¼9.9 Hz, 1H), 6.63 (d, J¼2.1 Hz, 1H), 6.80 (d, J¼8.4 Hz, 2H), 7.20 (d,
J¼8.4 Hz, 2H), 7.21 (d, J¼8.1 Hz,1H),13.19 (br s,1H); 13C NMR (CDCl3)
First, protein structures were extracted from the Protein Data-
bank (pdb) file (containing only non-hydrogen atoms). The pro-
tein’s pdb files were edited with AutoDockTools-1.5.1 (on Linux
system) to protonate polar hydrogen atoms, add Kollman charges,
and save as a pdbqt file. Furthermore, ligand structures were
optimized by Chem 3D Ultra version 8.0 (Run MOPAC minimize
energy to minimum rms Gradient 0.001) to get the structure (pdb
file). Alternatively, the X-ray structure of morusin was extracted
from Cambridge Chemical Database (pdb file). The ligand file was
input into AutoDockTools-1.5.1 program, detected the root of
molecule, and output as a pdbqt file as well.
d
17.6, 24.3, 25.6, 28.1, 28.1, 55.2, 70.2, 77.9, 99.6, 100.9, 100.9, 105.1,
107.6, 113.9, 114.6, 115.0, 121.1, 121.4, 126.7, 128.2, 128.6, 131.6, 132.3,
152.4, 157.7, 159.2, 159.3, 161.2, 161.2, 161.4, 182.6, 13C NMR
[(CD3)2CO]
d 16.8, 23.8, 24.9, 27.4, 27.4, 54.5, 69.8, 77.8, 98.9, 100.6,
100.8, 104.6, 107.5, 113.5, 113.7, 114.5, 120.7, 121.6, 127.1, 128.6, 128.9,
131.4,131.5,152.2,157.9, 159.1,159.5, 160.9, 161.6,161.8,182.2, HRMS
(EI) calcd for C33H32O7 (Mþ) 540.2148, found 540.2158.
4.8. 2-[2-Hydroxy-4-(4-methoxybenzyloxy)phenyl]-
5-hydroxy-8,8-dimethyl-3-(3-methyl-but-2-enyl)-pyrano-
[2,3-f]chromen-4-one (10b)
4.10.1. Grid and docking studies. To predict the energetically fa-
vorable positions of ligand molecules in the interior structure of the
protein target, a rectangular grid box of 21.75ꢁ21.75ꢁ21.75 Å3 with
grid points separated by 0.333 Å, centered on the midpoint of the
ligand binding pocket. It was essential to modify the AutoGrid
program to enable docking in the presence of metals and hetero-
atoms. Subsequently, Automated docking studies were performed
with Lamarckian Genetic Algorithm to provide the binding energies
and conformations of protein–ligand complexes.
This compound was prepared as light yellow oil according to the
previous procedures. IR (KBr) nmax: 3400, 2975, 2924, 1650, 1620,
1580,1265,1184, 850,780 cmꢀ1,1HNMR
d1.36(s, 3H),1.41(s, 6H),1.60
(s, 3H), 3.11 (d, J¼6.6 Hz,2H), 3.81(s, 3H), 5.01(s, 2H), 5.08(t, J¼6.6 Hz,
1H), 5.48 (d, J¼8.4 Hz,1H), 6.15 (s,1H), 6.58 (d, J¼9.9 Hz,1H), 6.63 (dd,
J¼9.9, 2.1 Hz, 1H), 6.64 (d, J¼2.1 Hz, 1H), 6.80 (br s, 1H), 6.92 (d,
J¼8.4 Hz, 2H), 7.22 (d, J¼8.4 Hz,1H), 7.36 (d, J¼8.4 Hz, 2H),13.19 (br s,
4.11. 5-Lipoxygenase assay
1H); 13C NMR (CDCl3)
d 17.7, 24.2, 25.6, 28.2, 28.2, 55.3, 69.9, 78.1, 99.7,
101.1, 103.0, 104.8, 107.9, 112.5, 114.0, 114.8, 120.9, 121.3, 127.0, 128.4,
129.3, 131.3, 133.0, 152.1, 155.3, 159.3, 159.5, 159.9, 161.1, 161.9, 182.2,
Possible inhibition of 5-lipoxygenase activity was determined
by the method of Sircar et al.30 and modified by Evans.31 All con-
centrations refer to final concentrations in 3 mL cuvettes main-
tained at 25 ꢂC in a thermostated bath. The assay mixture contained
13C NMR [(CD3)2CO]
d 16.8, 23.7, 24.9, 27.3, 27.3, 54.6, 69.5, 77.9, 98.8,
100.7, 102.6, 104.7, 106.4, 112.9, 113.8, 114.4, 120.9, 121.5, 127.1, 128.8,
129.4, 131.4, 131.5, 152.3, 156.4, 159.1, 159.6, 161.2, 161.8, 161.9, 182.3,
HRMS (EI) calcd for C33H32O7 (Mþ) 540.2148, found 540.2150.
10
mL of various chemicals (including CAPE, himanimide C, and
morusin) dissolved in DMSO, 0.1 M potassium phosphate buffer