Bioconjugate Chemistry
Article
13C NMR (CDCl3, 75 MHz) δ = 170.2, 156.0, 152.9, 141.5,
124.6, 107.0, 79.1, 72.1, 70.5 (2 signals), 70.4, 70.3, 70.0 (2
signals), 56.0, 40.2, 28.2 ppm.
(s, 2H), 5.70 (br, 1H), 4.37 (q, J = 7.4 Hz, 2H), 3.94 (s, 6H),
1.40 (t, J = 7.4 Hz, 3H) ppm. 13C NMR (CDCl3, 75 MHz) δ =
166.3, 146.5, 139.0, 121.3, 106.5, 60.9, 56.3, 14.3 ppm.
4-(2-(2-(2-(2-Azidoethoxy)ethoxy)ethoxy)ethoxy)-3,5-di-
methoxybenzoic Acid Ethyl Ester 4. An amount of 9.4 g of
syringic acid ethyl ester (41.6 mmol) was dissolved in 150 mL
of DMF. Cs2CO3 (20.3 g, 62.4 mmol) and 2-(2-(2-(2-
azidoethoxy)ethoxy)ethoxy)ethyl methane sulfonate (13.4 g,
45.0 mmol) were added, and the mixture was stirred at 70 °C
for 4 h. The main amount of DMF was evaporated at reduced
pressure; the residue was suspended in ethyl acetate and
successively washed with satd aq ammonium chloride solution
and brine. After drying over MgSO4 and filtration, the solvents
(2S,4R)-N-Boc-4-((E)-3-(3,4-dimethoxyphenyl)acrylamido)-
proline Methyl Ester 9. An amount of 760 mg (3.65 mmol) of
3,4-dimethoxycinnamic acid (7) was dissolved in toluene (25
mL) and treated with 1.45 mL (2.38 g, 20.0 mmol) of thionyl
chloride. After refluxing for 4 h, the solvent and excess thionyl
chloride were removed by evaporation (60 °C, 130 mbar). The
residue was dissolved in chloroform and added dropwise to a
solution of 1.00 g (3.56 mmol) of 6 and 1.56 mL (1.16 g, 9.00
mmol) of diisopropylethylamine (DIPEA) in 20 mL of
chloroform at 0 °C. After stirring overnight at room
temperature, the organic solution was successively washed
with water, diluted hydrochloric acid, and brine and dried over
MgSO4. Filtration and evaporation of the solvent yielded 1.34 g
of a yellow foam, which was purified by flash column
chromatography (cyclohexane/ethyl acetate 1:1→1:2). Yield:
1
were evaporated. Yield: 17.0 g, 39.8 mmol, 96%. H NMR
(CDCl3, 300 MHz) δ = 7.29 (s, 2H), 4.37 (q, J = 7.2 Hz, 2H),
4.23−4.19 (m, 2H), 3.90 (s, 6H), 3.84−3.79 (m, 2H), 3.75−
3.70 (m, 2H), 3.69−3.65 (m, 8H), 3.39 (t, J = 4.8 Hz, 2H),
1.40 (t, J = 7.2 Hz, 3H) ppm. 13C NMR (CDCl3, 75 MHz) δ =
166.1, 152.9, 141.0, 125.5, 106.6, 72.1, 70.5 (4 signals), 70.3,
69.9, 61.0, 56.0, 50.5, 14.2 ppm.
1
800 mg of the product as a white foam (1.87 mmol, 52%). H
NMR (CDCl3, 300 MHz) δ = 7.57 (d, J = 15.9 Hz, 1H), 7.11−
7.00 (m, 2H), 6.84 (d, J = 8.4 Hz, 1H), 6.46 (d, br, J = 6.4 Hz,
0.6H), 6.35 (m, 0.4H), 6.33 (d, J = 15.9 Hz, 1H), 4.74−4.60
(m, 1H), 4.43 (t, J = 7.0 Hz, 0.4H), 4.30 (t, J = 7.8 Hz, 0.6H),
3.90 (s, 3H), 3.89 (s, 3H), 3.85−3.77 (m, 1H), 3.75 (s, 1.8H),
3.72 (s, 1.2H), 3.54−3.47 (m, 0.6H), 3.43−3.35 (m, 0.4H),
2.47−2.36 (m, 0.6H), 2.32−2.22 (m, 1.4H), 1.46 (s, 3.6H),
1.43 (s, 5.4H) ppm. 13C NMR (CDCl3, 75 MHz, major) δ =
173.0, 166.0, 153.8, 150.6, 149.1, 141.3, 127.6, 122.1, 118.0,
111.1, 109.6, 80.7, 57.7, 55.9, 55.8, 52.3, 51.6, 48.3, 37.1, 28.2
ppm. 13C NMR (CDCl3, 75 MHz, minor) δ = 172.6, 165.9,
154.2, 150.6, 149.1, 141.4, 127.6, 122.0, 117.9, 111.1, 109.5,
80.7, 57.5, 55.9, 55.8, 52.1, 51.6, 48.7, 36.0, 28.3 ppm. HRMS
(EI): m/z = 457.1937 [M + Na]+ (calcd 457.1945), 891.3983
[2M + Na]+ (calcd 891.3998), 1325.6004 [3M + Na]+ (calcd
1325.6051).
4-(2-(2-(2-(2-Aminoethoxy)ethoxy)ethoxy)ethoxy)-3,5-di-
methoxybenzoic Acid Ethyl Ester. The above azide (11.0 g,
25.7 mmol) was dissolved in ethanol (150 mL), and a small
portion of Pd/C (10%, Sigma-Aldrich) was added. The flask
was evacuated and refilled with hydrogen. This procedure was
repeated three times, and the mixture was stirred under a
hydrogen atmosphere overnight. Filtration over Celite (acid-
washed, Sigma-Aldrich) and evaporation of the solvent yielded
10.3 g (25.6 mmol, 99%) of the product as a clear oil. 1H NMR
(CDCl3, 300 MHz) δ = 7.21 (s, 2H), 4.29 (q, J = 7.2 Hz, 2H),
4.15−4.10 (m, 2H), 3.81 (s, 6H), 3.75−3.71 (m, 2H), 3.67−
3.53 (m, 11H), 3.45−3.41 (m, 1H), 3.35−3.29 (m, 1H), 2.80−
2.75 (m, 1H), 1.31 (t, J = 7.2 Hz, 3H) ppm. 13C NMR (CDCl3,
75 MHz) δ = 165.9, 152.8, 141.0, 125.3, 106.4, 72.0, 71.3, 70.4
(2 signals), 70.3, 70.2, 70.1, 60.8, 55.9, 51.1, 14.1 ppm.
4-(2-(2-(2-(2-N-Boc-aminoethoxy)ethoxy)ethoxy)ethoxy)-
3,5-dimethoxybenzoic Acid Ethyl Ester. The above amine
(5.05 g, 12.6 mmol) was dissolved in a 1:1 mixture of MeOH
and tBuOH (40 mL) and was treated with a solution of 3.27 g
(2S,4R)-N-Boc-4-((E)-3-(benzo[d][1,3]dioxol-5-yl)-
acrylamido)proline Methyl Ester 10. An amount of 700 mg
(3.64 mmol) of 3,4-methylenedioxycinnamic acid (8) was
dissolved in toluene (30 mL) and treated with 1.45 mL (2.38 g,
20.0 mmol) of thionyl chloride. After refluxing for 3.5 h, the
solvent and excess thionyl chloride were removed by
evaporation (60 °C, 130 mbar). The residue was dissolved in
chloroform and added dropwise to a solution of 1.00 g (3.56
mmol) of 6 and 1.56 mL (1.16 g, 9.00 mmol) of DIPEA in 20
mL of chloroform at 0 °C. After stirring overnight at room
temperature, the organic solution was successively washed with
water, diluted hydrochloric acid, and brine and dried over
MgSO4. Filtration and evaporation of the solvent yielded 1.32g
of an off-white foam, which was purified by flash column
chromatography (cyclohexane/ethyl acetate 1:1). Yield: 1.03 g
t
(15.0 mmol) of Boc2O in BuOH dropwise. The mixture was
stirred overnight at room temperature, then the solvent was
evaporated and the crude residue was purified by flash column
chromatography (cyclohexane/ethyl acetate 1:1), yield 4.95 g
1
(9.87 mmol, 78%). H NMR (CDCl3, 300 MHz) δ = 7.22 (s,
2H), 5.00 (br, 1H), 4.30 (q, J = 7.1 Hz, 2H), 4.16−4.11 (m,
2H), 3.82 (s, 6H), 3.76−3.72 (m, 2H), 3.68−3.63 (m, 2H),
3.61−3.52 (m, 6H), 3.46 (t, J = 4.8 Hz, 2H), 3.27−3.20 (m,
2H), 1.45 (s, 9H), 1.32 (t, J = 7.1 Hz, 3H) ppm. 13C NMR
(CDCl3, 75 MHz) δ = 166.2, 156.0, 152.9, 141.0, 125.5, 106.6,
79.1, 72.2, 70.6 (2 signals), 70.5, 70.4, 70.2, 70.1, 61.0, 56.1,
40.3, 28.4, 14.3 ppm.
1
of the product as a white foam (2.46 mmol, 70%). H NMR
4-(2-(2-(2-(2-N-Boc-aminoethoxy)ethoxy)ethoxy)ethoxy)-
3,5-dimethoxybenzoic Acid 5. The above ester (4.95 g, 9.87
mmol) was dissolved in a 3:1:1 mixture of THF/MeOH/water
(50 mL). Lithium hydroxide (1.44g 60.0 mmol) was added, and
the mixture was stirred overnight at room temperature. The
solvent were removed by evaporation and the residue taken up
in water and acidified with 2.5 M HCl. Extraction with
chloroform yielded the product as a clear oil (4.64 g, 9.80
mmol, 99%). 1H NMR (CDCl3, 300 MHz) δ = 11.22 (br, 1H),
7.27 (s, 2H), 5.10 (br, 1H), 4.17−4.13 (m, 2H), 3.82 (s, 6H),
3.76−3.72 (m, 2H), 3.69−3.63 (m, 2H), 3.62−3.53 (m, 6H),
3.48 (t, J = 5.1 Hz, 2H), 3.29−3.21 (m, 2H), 1.36 (s, 9H) ppm.
(CDCl3, 300 MHz) δ = 7.54 (d, J = 15.4 Hz, 1H), 7.00−6.95
(m, 2H), 6.79 (d, J = 8.9 Hz, 1H), 6.29−6.20 (m, 1.6H), 6.07−
6.01 (m, 0.4H), 5.99 (s, 2H), 4.65 (br, 1H), 4.43 (t, J = 6.9 Hz,
0.4H), 4.31 (t, J = 7.4 Hz, 0.6H), 3.90−3.77 (m, 1H), 3.75 (s,
3H), 3.50 (dd, J = 11.1 Hz, J = 2.5 Hz, 0.6H), 3.37 (dd, J = 11.3
Hz, J = 4.0 Hz, 0.4H), 2.45−2.35 (m, 0.6H), 2.33−2.22 (M,
1.4H), 1.46 (s, 3.6H), 1.43 (s, 5.4H) ppm. 13C NMR (CDCl3,
75 MHz, major) δ = 173.0, 166.0, 153.8, 149.2, 148.3, 141.3,
129.1, 124.0, 118.3, 108.5, 106.3, 101.4, 80.7, 57.8, 52.2, 51.6,
48.4, 37.1, 28.3 ppm. 13C NMR (CDCl3, 75 MHz, minor) δ =
172.7, 167.2, 154.4, 149.6, 148.3, 141.5, 129.0, 124.3, 118.0,
108.5, 106.5, 101.5, 80.7, 57.5, 52.2, 51.6, 48.7, 35.9, 28.4 ppm.
C
dx.doi.org/10.1021/bc400074w | Bioconjugate Chem. XXXX, XXX, XXX−XXX