2810 J ournal of Medicinal Chemistry, 1996, Vol. 39, No. 14
Melnick et al.
(CDCl3) δ 7.20 (2 H, d, J ) 8.5 Hz), 7.02 (2 H, s), 6.89 (1 H,
bs), 6.59 (2 H, d, J ) 8.5 Hz), 6.13 (1 H, bs), 3.60 (3 H, bs),
3.40 (1 H, br), 2.29 (3 H, s), 2.21, (3 H, s), 1.78 (6 H, bs), 0.80
(9 H, s), -0.12 (6 H, s).
tions of compounds required to produce 50% inhibition of
HIV-1 induced cell death (ED50) were determined and are
listed in Table 1. The concentration of compound that
produced a 50% reduction in the number of viable cells
(uninfected with virus) as determined by metabolism of MTT
is designated the TC50 in Table 1. The details of the methods
used in the pharmacokinetic studies have been reported
previously.10
N-[2-[(ter t-Bu tyld im eth ylsilyl)oxy]eth yl]-2,5-d im eth yl-
N-[1-m eth yl-1-[4-(2-m or p h olin -4-yleth oxy)p h en yl]eth yl]-
ben za m id e (60). A mixture of phenol 59 (264 mg, 0.59 mmol),
CsCO3 (780 mg, 2.4 mmol), and 2-(chloroethyl)morpholine (free
base, prepared from the hydrochloride salt via extraction with
EtOAc-saturated NaHCO3 and MgSO4 drying; 893 mg, 6.0
mmol) in 30 mL of dry dioxane was heated to 80 °C for 1 h.
After cooling to 25 °C the reaction was filtered, concentrated,
taken up in EtOAc, washed with water and brine, dried
(MgSO4), and concentrated again. Chromatography (SiO2,
100% EtOAc) yielded 182 mg (55%) of ether 60 as a viscous
oil: 1H NMR (CDCl3) δ 7.32 (2 H, d, J ) 8.7 Hz), 7.00 (2 H, s),
6.86 (1 H, bs), 6.86 (2 H, d, J ) 8.7 Hz, overlapping bs), 4.10
(2 H, t, J ) 7.7 Hz), 3.74 (4 H, t, J ) 4.6 Hz), 3.58 (4 H, br s),
2.79 (2 H, t, J ) 5.7 Hz), 2.58 (4 H, t, J ) 4.6 Hz), 2.28 (3 H,
s), 2.21 (3 H, s), 1.79 (6 H, bs), 0.80 (9 H, s), -0.13 (6 H, s).
N -(1-E t h ylcyclop e n t yl)-N -(2-h yd r oxye t h yl)-2-[3-h y-
d r oxy-4-[2-[(2-h yd r oxyeth yl)[1-m eth yl-1-[4-(2-m or p h olin -
4-ylet h oxy)p h en yl]et h yl]ca r b a m oyl]-4-m et h ylp h en yl]-
bu tyl]ben za m id e (62) was prepared as described previously.
Amide 60 was lithiated with s-BuLi and quenched with
Weinreb amide 34c to give ketone 61 (75%) which was reduced
(NaBH4) and deprotected (n-Bu4NF) to give 62 as an amor-
phous solid after preparative thin layer chromatography on
silica (10% MeOH/CH2Cl2) (35% yield from 60): 1H NMR
(CDCl3) δ 7.00-7.40 (9 H, m), 6.86 (2 H, m), 4.60 (1 H, br),
4.10 (2 H, m), 3.74 (4 H, bt), 3.48 (10 H, br), 3.25 (1 H, br), 3.0
(1 H, br), 2.65-2.75 (4 H, m), 2.58 (6 H, br s), 2.29 (3 H, bs),
2.26 (3 H, bs), 2.00 (2 H, br), 1.60-1.85 (12 H, br), 0.95 (3 H,
br). Anal. (C45H63N3O7‚1.0H2O) C, H, N.
N-[2-[(ter t-Bu t yld ip h en ylsilyl)oxy]et h yl]-5-ch lor o-2-
m et h yl-N-(1-m et h yl-1-p h en ylet h yl)b en za m id e (20b ).
3-Chloro-5-methylbenzoic acid27 was converted to the acid
chloride as described previously ((COCl)2, catalytic DMF) and
treated with amine 16b to afford the amide 20b in 73% yield
after chromatography (SiO2, 7:1 hexanes/EtOAc).
N-[2-[(ter t-Bu t yld ip h en ylsilyl)oxy]et h yl]-2-[4-[2-[[2-
[(ter t-bu tyld ip h en ylsilyl)oxy]eth yl](1-m eth yl-1-p h en yl-
eth yl)ca r ba m oyl]-4-ch lor op h en yl]-3-oxobu tyl]-N-(1-eth -
ylcyclop en tyl]ben za m id e (39bc) was prepared as described
previously. Amide 20b was lithiated with s-BuLi and quenched
with Weinreb amide 34c to give ketone 39bc (35%) after
chromatography (SiO2, 20-33% hexanes/EtOAc): 1H NMR
(CDCl3) δ 7.00-7.70 (32 H, m), 3.73 (2 H, m), 3.65 (2 H, m),
3.48 (5 H, m), 3.25 (1 H, br), 2.70 (4 H, m), 1.75-2.00 (8 H,
m), 1.70 (8 H, bs), 1.05 (9 H, s), 0.95 (9 H, s), 0.85 (3 H, t, J )
7.2 Hz). Anal. (C70H83N2O5Si2Cl) C, H, N, Cl.
2-[4-[4-Ch lor o-2-[(2-h yd r oxyeth yl)(1-m eth yl-1-p h en yl-
eth yl)ca r ba m oyl]p h en yl]-3-h yd r oxybu tyl]-N-(1-eth ylcy-
clop en tyl)-N-(2-h yd r oxyeth yl)ben za m id e Alcoh ol (43bc).
Ketone 39bc was reduced (NaBH4) and deprotected (n-Bu4NF)
as described previously to give 43bc as an amorphous solid
after chromatography on silica (2:1 EtOAc/hexanes) (84% yield
from 39bc): 1H NMR (CDCl3) δ 7.46 (1 H, bs), 7.00-7.40 (11 H,
m), 4.95 (1 H, bs), 3.90 (1 H, bs), 3.40-3.75 (7 H, m), 3.23 (1
H, m), 2.55-2.75 (4 H, m), 2.10-2.30 (2 H, m), 1.90 (8 H, m),
1.50-1.75 (10 H, m), 0.96 (3 H, t, J ) 7.2 Hz). Anal.
(C38H49N2O5Cl‚0.4H2O) C, H, N, Cl.
Cr ysta llogr a p h y. The crystallization conditions, data
collection, and structure solution methods have been previ-
ously reported.10 The resolution limit of the diffraction data
and the final crystallographic R factors for the structures are
as follows: compound 9, 2.4 Å and R ) 0.174; compound 40a b,
2.35 Å and R ) 0.186; compound 40a d , 2.2 Å and R ) 0.213;
compound 40a g, 2.1 Å and R ) 0.211; and compound 42bc,
2.3 Å and R ) 0.189.
Refer en ces
(1) Darke, P. L.; Huff, J . R. HIV Protease as an Inhibitor Target
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(2) Boehme, R. E.; Borthwick, A. D.; Wyatt, P. G. Chapter 15
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(3) For a recent review, see: Appelt, K. Crystal Structures of HIV-1
Protease-Inhibitor Complexes. Perspect. Drug Disc. Des. 1993,
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(4) Roberts, N. A.; Martin, J . A.; Kinchington, D.; Broadhurst, A.
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teinase Inhibitors. Science 1990, 248, 358-361.
(5) Kaldor, S. W.; Hammond, M.; Dressman, B. A.; Fritz, J . E.;
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(6) West, M. L.; Fairlie, D. P. Targeting HIV-1 Protease: A Test of
Drug-Design Methodologies. Trends Pharmacol. Sci. 1995, 16,
67-74. Thaisrivongs, S. Chapter 14 HIV Protease Inhibitors.
Annu. Rep. Med. Chem. 1994, 29, 133-144. Kempf, D. J .; Marsh,
K. C.; Denissen, J . F.; McDonald, E.; Vasavanonda, S.; Flentge,
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a Potent Inhibitor of Human
Immunodeficiency Virus Protease and Has High Oral Bioavail-
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(7) Lam, P. Y. S.; J abhav, P. K.; Eyermann, C. J .; Hodge, C. N.;
Ru, Y.; Bacheler, L. T., Meek, J . L.; Otto, M. J .; Rayner, M. M.;
Wong, Y. N.; Chang, C.-H.; Weber, P. C.; J ackson, D. A.; Sharpe,
T. R.; Viitanen, S.-E. Rational Design of Potent, Bioavailable,
Nonpeptide Cyclic Ureas as HIV Protease Inhibitors. Science
1994, 263, 380-384.
(8) Vara Prasad, J . V. N.; Para, K. S.; Lunney, E. A.; Ortwine, D.
F.; Dunbar, J . B.; Ferguson, D.; Tummino, P. J .; Hupe, D.; Tait,
B. D.; Domagala, J . M.; Humblet, C.; Bhat, T. N.; Liu, B.; Guerin,
D. M. A.; Baldwin, E. T.; Erickson, J . W.; Sawyer, T. K. Novel
Series of Achiral Low Molecular Weight and Potent HIV-1
Protease Inhibitors. J . Am. Chem. Soc. 1994, 116, 6989-6990.
Vara Prasad, J . V. N.; Para, K. S.; Tummino, P. J .; Ferguson,
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L.; Hingorani, G.; Domagala, J . M.; Gracheck, S. J .; Bhat, T.
N.; Liu, B.; Baldwin, E. T.; Erickson, J . W.; Sawyer, T. K.
Nonpeptide Potent HIV-1 Protease Inhibitors: (4-Hydroxy-6-
phenyl-2-oxo-2H-pyran-3-yl)thiomethanes That Span P1-P2′
Subsites in a Unique Mode of Active Site Binding. J . Med. Chem.
1995, 38, 898-905. Thaisrivongs, S.; Tomich, P. K.; Waten-
paugh, K. D.; Chong, K.-T.; Howe, W. J .; Yang, C.-P.; Strohbach,
J . W.; Turner, S. R.; McGrath, J . P.; Bohanon, M. J .; Lynn, J .
C.; Mulichak, A. M.; Spinelli, P. A.; Hinshaw, R. R.; Pagano, P.
J .; Moon, J . B.; Ruwart, M. J .; Wilkinson, K. F.; Rush, B. D.;
Zipp, G. L.; Dalga, R. J .; Schwende, F. J .; Howard, G. M.;
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T. J .; Cole, S. L.; Zaya, R. M.; Piper, R. C.; J effrey, P. Structure-
Based Design of HIV Protease Inhibitors: 4-Hydroxycourmarins
and 4-Hydroxy-2-pyrones as Non-peptidic Inhibitors. J . Med.
Chem. 1994, 37, 3200-3204.
(9) Previous paper: Reich, S. H.; Melnick, M.; Pino, M. J .; Fuhry,
M. A. M.; Trippe, A. J .; Appelt, K.; Davies, J . F.; Wu, B.-W.;
Musick, L. Structure-Based Design and Synthesis of Substituted
2-Butanols as Nonpeptidic Inhibitors of HIV Protease: Second-
ary Amide Series. J . Med. Chem. 1996, 39, 2781-2794.
(10) For
a preliminary account of this work, see: Reich, S. H.;
Melnick, M.; Davies, J . F.; Appelt, K.; Lewis, K. K.; Fuhry, M.
A.; Pino, M.; Trippe, A. J .; Nguyen, D.; Dawson, H.; Wu, B.-W.;
Musick, L.; Kosa, M.; Kahil, D.; Webber, S.; Gehlhaar, D.K.;
Andrada, D.; Shetty, B. Protein Structure-Based Design of
Potent Orally Bioavailable, Nonpeptide Inhibitors of Human
Immunodeficiency Virus Protease. Proc. Natl. Acad. Sci. U.S.A.
1995, 92, 3298-3302.
Biology a n d P h a r m a cology. The details of the method
used to determine Ki values has been described previously.10
The ability of the compounds to prevent HIV-1-induced cell
death was determined at Southern Research Institute (Bir-
mingham, AL). Cell viability was measured by metabolism
of the tetrazolium dye MTT in CEM-SS cells. The concentra-