Job/Unit: O30084
/KAP1
Date: 05-07-13 10:51:48
Pages: 9
Deuterium and Tritium Labelling of N-Acyl-l-Homoserine Lactones
product was dried by a high vacuum pump to give 9-decenoyl
chloride, which was used in the next step without further purifica-
tion.
sulfate solution and saturated sodium chloride solution. The water
solution was washed one more time with ethyl acetate. After drying
the organic solution over anhydrous sodium sulfate, the solvent was
evaporated in vacuo. The crude residue was purified by flash col-
umn chromatography (hexane/ethyl acetate, 2:3) to give the desired
product as a white solid.
9-Decenoyl Chloride (4d): Yield 257 mg (68%); Rf = 0.76 (hexane/
ethyl acetate, 5:1). 1H NMR (500 MHz, CDCl3): δ = 1.25–1.44 (m,
8 H, 4ϫCH2), 1.65–1.69 (m, 2 H, CH2CH2COCl), 1.71–1.76 (m,
2 H, CH2=CHCH2), 1.97–2.26 (m, 2 H, CH2COCl), 4.94–5.03 (dd,
N-(Pentanoyl-d2)-L-homoserine Lactone (7a): Yield 16 mg (86%); Rf
1J = 17.2, 2J = 2.1 Hz, 2 H, CH2=CHCH2), 5.77–5.86 (m, 1 H, = 0.2 (hexane/ethyl acetate, 2:3). H NMR (500 MHz, CDCl3): δ =
1
CH2=CHCH2) ppm. 13C NMR (125 MHz, CDCl3): δ = 24.2 (s, C- 0.80–1.10 (m, 1.8 H, CDH2), 1.22–1.39 (m, 1 H, CDHCDH2),
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2
3), 28.3 (s, C-4), 28.8 (m, C-5), 29.0 (m, C-6), 29.5 (m, C-7, CH2),
33.7 (m, C-8), 47.1 (s, C-2), 114.2 (s, C-10), 138.9 (s, C-9), 169.6 (s,
C-1) ppm. MS (ESI-TOF): m/z (%) = 211 (100) [M+ + Na].
1.50–1.69 (m, 2 H, CH2CH2CO), 2.13 (dddd, J = 20.3, J = 11.5,
3J = 8.8, 4J = 5.0 Hz, 1 H, 3α-H), 2.18–2.38 (m, 2 H, COCH2),
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2
3
2.86 (ddd, J = 13.9, J = 8.6, J = 5.8 Hz, 1 H, 3β-H), 4.28 (ddd,
2
3
1
2
1J = 11.3, J = 9.3, J = 5.9 Hz, 1 H, 4α-H), 4.47 (td, J = 9.0, J
Preparation of Terminally Unsaturated N-Acyl-L-homoserine Lact-
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2
3
= 1.0 Hz, 1 H, 4β-H), 4.55 (ddd, J = 11.6, J = 8.6, J = 5.8 Hz,
ones. General Procedure II: To a stirred solution of l-homoserine
lactone hydrobromide (5) (1 equiv.) in CH2Cl2 (20 mL per 1 mmol)
at 0 °C and triethylamine (2.4 equiv.) was added. The mixture was
stirred at 0 °C for 0.5 h then the alkenoyl chloride (1 equiv.) was
added dropwise over 5 min. The reaction mixture was allowed to
come to room temperature and was stirred for 4 h. The solution
was evaporated to dryness and the residue was redissolved in ethyl
acetate and sequentially washed with 1 m sodium hydrogen carbon-
ate solution, 1 m potassium hydrogen sulfate solution and saturated
sodium chloride solution. After drying over anhydrous sodium
sulfate, the solvent was removed by rotary evaporation to leave the
crude product, which was subsequently purified by column
chromatography on silica with ethyl acetate.
1 H, 2-H), 6.00–6.19 (m, 1 H, NH) ppm. 13C NMR (125 MHz,
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1
CDCl3): δ = 13.5 (quint, J = 19.1 Hz, CЈ-5, CHD2), 22.1 (t, J =
19.1 Hz, CЈ-4, CHD), 27.4, 30.7, 35.9, 49.3, 66.1, 173.7, 175.5 ppm.
MS (ESI-TOF): m/z (%) = 188 (100) [M+ + H], 189 (39), 190 (24),
187 (22); Deuterium distribution: 13% d4, 21% d3, 54% d2, 12%
d1.
N-(1-Oxoheptanoyl-d2)-L-homoserine Lactone (7b): Yield 36 mg
1
(84%); Rf = 0.38 (hexane/ethyl acetate, 1:4). H NMR (500 MHz,
CDCl3): δ = 0.70–0.89 (m, 2 H, CDH2), 1.19–1.40 (m, 5.5 H,
CDH2CDH + 2ϫCH2), 1.51–1.69 (m, 2 H, CH2CH2CO), 2.17
1
(dddd, J = 20.4, 2J = 11.5, 3J = 8.8, 4J = 4.5 Hz, 1 H, 3α-H), 2.25
1
(m, 2 H, COCH2), 2.86 (ddd, J = 13.9, 2J = 8.5, 3J = 5.8 Hz, 1
1
2
3
H, 3β-H), 4.30 (ddd, J = 11.3, J = 9.3, J = 5.9 Hz, 1 H, 4α-H),
N-(1-Oxo-9-decenoyl)-L-homoserine Lactone (6d): Yield 288 mg
1
2
1
4.50 (td, J = 8.9, J = 0.8 Hz, 1 H, 4β-H), 4.60 (ddd, J = 11.6,
2J = 8.6, 3J = 6.3 Hz, 1 H, 2-H), 6.25 (d, 1J = 4.4 Hz, 1 H,
NH) ppm. 13C NMR (125 MHz, CDCl3): δ = 13.8 (quint, 1J =
1
(90%); Rf = 0.49 (hexane/ethyl acetate, 2:3). H NMR (500 MHz,
CDCl3): δ = 1.20–1.39 [m, 8 H, COCH2CH2(CH2)4], 1.50–1.1.68
(m, 2 H, COCH2CH2), 2.06 (dd, 1J = 13.9, 2J = 7.3 Hz, 2 H,
1
19.8 Hz, CЈ-7, CHD2), 22.2 (t, J = 19.1 Hz, CЈ-6, CHD), 25.4 (s,
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2
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2
COCH2), 2.18 (dddd, J = 18.4, J = 11.5, J = 8.8, J = 4.8 Hz, 1
CЈ-5, CH2), 30.3 (s, CЈ-4, CH2), 31.5 (s, CЈ-3, CH2), 33.9 (s, C-3,
CH2), 36.7 (s, CЈ-2, CH2), 49.2 (s, C-2, CH2), 66.2 (s, C-4, CH2),
174.0 (s, CЈ-1, C=O), 175.7 (s, C-1, C=O) ppm. MS (ESI-TOF):
m/z (%) = 216 (100) [M+ + H], 215 (79), 217 (53), 214 (41), 218
(15). Deuterium distribution: 6% d4, 18% d3, 35% d2, 27% d1, 14%
d0.
H, 3α-H), 2.27 (dt, 1J = 7.3, 2J = 1.4 Hz, 2 H, CH2=CHCH2), 2.91
(ddd, J = 13.9, J = 8.1, J = 5.8 Hz, 1 H, 3β-H), 4.3 (ddd, J =
11.3, 2J = 9.4, 3J = 5.9 Hz, 1 H, 4α-H), 4.49 (dt, 1J = 9.2, 2J =
0.9 Hz, 1 H, 4β-H), 4.59 (ddd, J = 11.6, J = 8.6, J = 5.8 Hz, 1
H, 2-H), 4.80–4.98 (m, 2 H, CH2=CH2CH2), 5.70–5.89 (m, 1 H,
CH2=CHCH2), 6.07 (d, 1J = 4.5 Hz, 1 H, NH) ppm. 13C NMR
(125 MHz, CDCl3): δ = 25.4 (s, CЈ-3, CH2), 28.8 (m, CЈ-4, CH2),
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2
3
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1
2
3
N-(1-Oxooctanoyl-d2)-L-homoserine Lactone (7c): Yield 41 mg
1
28.9 (m, CЈ-5, CH2), 29.3 (m, CЈ-4, CH2), 30.6 (s, C-3, CH2), 33.7 (74%); Rf = 0.49 (hexane/ethyl acetate, 1:4). H NMR (500 MHz,
(s, CЈ-8, CH2), 36.2 (s, CЈ-2, CH2), 49.2 (s, C-2, CH2), 66.2 (s, C- CDCl3): δ = 0.79–0.96 (m, 2 H, CDH2), 1.20–1.39 (m, 7.5 H,
4, CH2), 114.2 (s, CЈ-10, CH2), 139.1 (s, CЈ-9,CH), 173.8 (s, CЈ-1, CDH2CDH + 3ϫCH2), 1.40–1.58 (m, 2 H, CH2CH2CO), 2.19
C=O), 175.7 (s, C-1, C=O) ppm. MS (ESI-TOF): m/z (%) = 254
(dddd, 1J = 20.4, 2J = 11.5, 3J = 8.9, 4J = 4.4 Hz, 1 H, 3α-H), 2.15–
3
(100) [M+ + H].
2.31 (m, 2 H, COCH2), 2.88 (ddd, 1J = 13.3, 2J = 8.6, J = 5.9 Hz,
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1 H, 3β-H), 4.32 (ddd, J = 11.3, J = 9.3, J = 5.9 Hz, 1 H, 4α-
Preparation of Deuterium and Tritium Labelled N-Acyl-L-homo-
H), 4.50 (td, 1J = 9.1, 2J = 1.0 Hz, 1 H, 4β-H), 4.62 (ddd, 1J =
11.5, J = 8.5, J = 6.0 Hz, 1 H, 2-H), 6.27 (d, J = 4.8 Hz, 1 H,
NH) ppm. 13C NMR (125 MHz, CDCl3): δ = 13.9 (quint, 1J =
serine Lactones through Catalytic Reduction. General Procedure III:
1st Layer: N-(1-Oxo-9-decenoyl)-l-homoserine lactone (6d)
(1 equiv.) was dissolved in THF (2 mL per 0.1 mmol) and frozen
in liquid nitrogen. 2nd Layer: Palladium(II) acetate solution
(0.2 equiv.) in THF (2 mL per 0.02 mmol), acetic acid (500 μL;
8.2 mmol per 0.02 mmol) and methanol (or [D4]methanol)
(1.25 mL per 0.1 mmol) was added and frozen. 3rd Layer: Further
THF (1.5 mL per 0.1 mmol) was added and again frozen. 4th Layer:
Subsequently, sodium borohydride (1–4 equiv.; sodium borodeuter-
ide/sodium borotritide) was dissolved in 0.15–0.33 m water solution
of sodium hydroxide or sodium hydroxide (or sodium deuteroxide)
solution in H2O or in [D4]methanol (1 mL per 0.05 mmol) and
closed tightly in the reaction vessel. The reaction mixture was al-
lowed to come to the room temperature and agitated for 1–16 h.
After that time the mixture was filtered from black palladium resi-
due and the solvent was removed by rotary evaporation. The resi-
due was redissolved in ethyl acetate and washed sequentially with
1 m sodium hydrogen carbonate solution, 1 m potassium hydrogen
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20.6 Hz, CЈ-8, CHD2), 22.6 (t, J = 19.3 Hz, CЈ-7, CHD), 24.2 (s,
CЈ-6, CH2), 28.9 (m, CЈ-5, CH2), 30.3 (s, CЈ-4, CH2), 31.0 (s, CЈ-3,
CH2), 33.9 (s, C-3, CH2), 36.2 (s, CЈ-2, CH2), 49.3 (s, C-2, CH2),
66.2 (s, C-4, CH2), 174.0 (s, CЈ-1, C=O), 175.7 (s, C-1, C=O) ppm.
MS (ESI-TOF): m/z (%) = 230 (100) [M+ + H], 229 (83), 231 (62),
228 (31). Deuterium distribution: 23% d3, 36% d2, 30% d1, 11%
d0.
N-(1-Oxodecanoyl-d2)-L-homoserine Lactone (7d): Yield 17 mg
1
(94%); Rf = 0.59 (hexane/ethyl acetate, 1:4). H NMR (500 MHz,
CDCl3): δ = 0.87 (m, 2.14 H, CDH2), 1.15–1.35 [m, 11 H,
CDH2CDH(CH2)5], 1.50–1.71 (m, 2 H, CH2CH2CO), 2.12 (dddd,
2
3
4
1J = 20.4, J = 11.5, J = 8.9, J = 5.5 Hz, 1 H, 3α-H), 2.10–2.21
(m, 2 H, COCH2), 2.86 (ddd, J = 14.0, 2J = 8.6, 3J = 5.8 Hz, 1
H, 3β-H), 4.29 (ddd, J = 11.3, J = 9.3, J = 5.8 Hz, 1 H, 4α-H),
4.47 (td, J = 8.9, J = 0.9 Hz, 1 H, 4β-H), 4.56 (ddd, J = 11.6,
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Eur. J. Org. Chem. 0000, 0–0
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