Journal of the American Chemical Society
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ethyl ester 17 followed by cyclisation to lactam and deprotec-
calculations reveal that both trans conformers are respective-
1
2
3
4
tion including ionic hydrogenation gave 18. The amino group
was converted to the guanidine using N,N'-di-Boc-1H-
pyrazole-1-carboxamidine and deprotected with TFA to give
11 (Scheme 2, details in supporting information).
ly 9.1 and 8.7 kcal/mol more stable. Understanding orbital
and dipole alignments can enable more rational selection of
heterocyclic templates for elaboration in drug design and
discovery.
5
6
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8
ASSOCIATED CONTENT
Supporting Information
Experimental procedures, analytical data (1H, 13C NMR) for
all new compounds, CSD searches and cell assays. This mate-
rial is available free of charge via the Internet at
Scheme 1. Synthesis of the constrained agonist 10
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AUTHOR INFORMATION
Corresponding Authors
e-mail: r.reid@imb.uq.edu.au, d.fairlie@imb.uq.edu.au
Present Addresses
† Dr. Ranee Singh, Dept. Pharmacol. & Toxicol., Faculty of
Veterinary Medicine, Khon Kaen University, Thailand
Notes
The authors are inventors on C3a patent applications owned
by University of Queensland. No other competing interests.
a) NaOtBu, Ph2CHCOCl, THF -10 °C; b) H-Orn(Cbz)-OtBu,
NMM, EtOH, ꢀ; c) H2, 10% Pd-C, EtOH, room temp, 30 min;
d) glacial AcOH, 40 °C, 30 min; e) N,N'-Di-Boc-1H-pyrazole-
1-carboxamidine, DMF; f) TFA.
ACKNOWLEDGMENT
This study was supported by grants to DPF from the National
Health and Medical Research Council (APP1000745,
APP1028423, SPRF fellowship 1027369), the Australian Re-
search Council (DP130100629, DP1093245, FF0668733), the
ARC Centre of Excellence in Advanced Molecular Imaging
(CE140100011), and the Queensland Government (CIF grant).
Scheme 2. Synthesis of the constrained lactam antagonist 11
REFERENCES
(1) (a) Baumann, M.; Baxendale, I. R.; Ley, S. V.; Nikbin, N.
Beilstein J. Org. Chem. 2011, 7, 442. (b) Reid, R. C.; Yau, M.-K.; Singh,
R.; Hamidon, J. K.; Reed, A. N.; Chu, P.; Suen, J. Y.; Stoermer, M. J.;
Blakeney, J. S.; Lim, J.; Faber, J. M.; Fairlie, D. P. Nat. Commun. 2013,
4, 2802.
(2) Meanwell, N. A. J. Med. Chem. 2011, 54, 2529.
(3) Schaerfer, C.; Schulz-Gasch, T.; Ehrlich, H. C.; Guba, W.;
Rarey, M.; Stahl, M. J. Med. Chem. 2013, 56, 2016.
(4) Frisch, M. J.; Revision A.02 ed.; Gaussian Inc.: Wallingford CT,
2009.
(5) (a) Murray, J. S.; Lane, P.; Politzer, P. Int. J. Quantum Chem.
2008, 108, 2770. (b) Dudkin, V. Y. Chem. Heterocycl. Compd. (N. Y.,
NY, U. S.) 2012, 48, 27.
(6) (a) Franchetti, P.; Cappellacci, L.; Grifantini, M.; Barzi, A.;
Nocentini, G.; Yang, H.; O'Connor, A.; Jayaram, H. N.; Carrell, C.;
Goldstein, B. M. J. Med. Chem. 1995, 38, 3829. (b) Goldstein, B. M.; Li,
H.; Hallows, W. H.; Langs, D. A.; Franchetti, P.; Cappellacci, L.;
Grifantini, M. J. Med. Chem. 1994, 37, 1684. (c) Goldstein, B. M.;
Takusagawa, F.; Berman, H. M.; Srivastava, P. C.; Robins, R. K. J. Am.
Chem. Soc. 1983, 105, 7416. (d) Haginoya, N.; Kobayashi, S.;
Komoriya, S.; Yoshino, T.; Suzuki, M.; Shimada, T.; Watanabe, K.;
Hirokawa, Y.; Furugori, T.; Nagahara, T. J. Med. Chem. 2004, 47, 5167.
(e) Hayashi, K.; Ogawa, S.; Sano, S.; Shiro, M.; Yamaguchi, K.; Sei, Y.;
Nagao, Y. Chem. Pharm. Bull. 2008, 56, 802. (f) Hynes, J., Jr.; Wu, H.;
Pitt, S.; Shen, D. R.; Zhang, R.; Schieven, G. L.; Gillooly, K. M.;
Shuster, D. J.; Taylor, T. L.; Yang, X.; McIntyre, K. W.; McKinnon, M.;
Zhang, H.; Marathe, P. H.; Doweyko, A. M.; Kish, K.; Kiefer, S. E.;
Sack, J. S.; Newitt, J. A.; Barrish, J. C.; Dodd, J.; Leftheris, K. Bioorg.
Med. Chem. Lett. 2008, 18, 1762. (g) Ioannidis, S.; Lamb, M. L.;
a) H-Orn(Cbz)-OtBu, K2CO3, NaI, DMF; b) NaOH, H2O,
MeOH, THF; c) DCC, DCM; d) TFA, Et3SiH, PhSMe; e) N,N'-
Di-Boc-1H-pyrazole-1-carboxamidine, DMF; f) TFA.
In summary, multiple approaches used here show that an
aromatic heterocycle dictates the conformation of an adja-
cent carbonyl group. This finding enables predictions of con-
formational preferences for heterocyclic carboxamides, that
can profoundly influence interactions of small molecules
with proteins. This analysis is expected to extend to other
heterocyclic ring systems, where a single rotatable bond links
the heteroatom to a polar substituent. For example, we found
>200 picolinamides and 12 1,2,3-triazole-4-carboxamides in
the CSD where the N-C-C-O dihedral angle was ~180°. DFT
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