Full Papers
doi.org/10.1002/cmdc.202000942
ChemMedChem
1
3
Experimental Section
3.18–3.12 (m, 1H), 3.10–2.99 ppm (m, 1H); C NMR (101 MHz,
CD OD): δ=168.2 (1 C), 84.8 (1 C), 83.1 (1 C), 73.6 (0.5 C), 73.4
0.5 C), 64.9 (1 C), 43.8 ppm (1 C); MS (ESI): [M+H] calcd for
3
+
(
Chemistry
C H FNO=120.08; found 120.15.
5
10
Reagents and solvents were obtained from commercial suppliers in
reagent grade and were used without further purification unless
stated otherwise. Dichloromethane as solvent was distilled from
CaH2 under argon. The reaction progress was controlled with
analytical thin-layer chromatography (TLC) on precoated silica gel
GF254 plates (Macherey Nagel, Düren, Germany). Compounds were
detected under UV light (254 and 366 nm) or through staining with
2
(
1
-{6-[2-(Fluoromethyl)morpholino]hexyl}isoindoline-1,3-dione (6): 2-
Fluoromethyl)morpholine hydroformiate (5; 1001 mg, 6.06 mmol,
equiv.) was dissolved in dry dimethylformamide (10 mL) and
triethylamine (3 mL) was added. Then 2-(6-bromohexyl)isoindoline-
,3-dione (2 g, 6,45 mmol, 1.06 equiv.) was added and the resulting
1
solution was heated to 105°C for 4 h. The mixture was allowed to
cool down to room temperature and water was added. The
aqueous layer was extracted with ethyl acetate (3x). Then the
combined organic layers were washed with water and brine, dried
over sodium sulphate, filtered, and the solvent was evaporated
under reduced pressure. The residue was purified with flash column
chromatography (CH Cl /MeOH 98:2, R =0.33) to yield 2-(6-[2-
iodine, KMnO , or Ehrlich’s reagent. Crude products after work-up
4
were purified by manual flash column chromatography. Silica gel
(particle size of 40–63 μM; VWR chemicals, Leuven, Belgium) was
used as the stationary phase and mixtures from petroleum ether/
ethyl acetate or dichloromethane/methanol as eluent systems. The
pure compounds were submitted for nuclear magnetic resonance
spectra on a AV-400 NMR instrument (Bruker) in deuterated
solvents (DMSO-d , CDCl , CD Cl , CD OD). Chemical shifts are
2
2
f
(fluoromethyl)morpholino]hexyl}isoindoline-1,3-dione (6; 1.334 g,
1
3
.83 mmol, 63%) as colorless oil. H NMR (400 MHz, CDCl ): δ=
3
6
3
2
2
3
7
.80–7.74 (m, 2H), 7.66–7.61 (m, 2H), 4.41–4.36 (m, 1H), 4.29–4.24
expressed in ppm relative to DMSO-d , CDCl , CD Cl , or CD OD
6
3
2
2
3
1
13
(m, 1H), 3.83 (ddd, J=11.3, 3.3, 1.7 Hz, 1H), 3.66–3.50 (m, 4H), 2.74–
.67 (m, 1H), 2.61 (dd, J=11.5, 1.9 Hz, 1H), 2.34–2.22 (m, 2H), 2.05
td, J=11.4, 3.3 Hz, 1H), 1.94–1.82 (m, 1H), 1.69–1.56 (m, 3H), 1.50–
(
2.50/7.26/5.32/3.31 for H; 39.5/77.2/53.5/49.0 for C). Purity of
2
(
compounds was controlled with analytical HPLC on a Shimadzu
system equipped with a DGU-20A3R controller, LC20AB liquid
chromatograph, and SPD-20 A UV/vis detector (Shimadzu): Sta-
tionary phase: Synergi 4 U fusion RP (Synergi, Aschaffenburg,
Germany) column; mobile phase: water+0.1% formic acid (phase
A) and methanol+0.1% formic acid (phase B) with a flow of
1
3
1
1
7
3
.36 (m, 3H), 1.37–1.24 ppm (m, 4H); C NMR (101 MHz, CDCl ): δ=
3
68.4 (1 C), 133.9 (2 C), 132.2 (1 C), 123.3 (2 C), 84.9 (1 C), 83.1 (1 C),
4.3 (0.5 C), 74.1 (0.5 C), 66.8 (1 C), 58.8 (1 C), 54.0 (1 C), 52.9 (1 C),
7.9 (1 C), 28.5 (1 C), 27.0 (1 C), 26.7 (1 C), 26.4 ppm (1 C); MS (ESI):
+
[M+H] calcd for C H N O =349.19, found 349.15.
1
9
26
2
4
1.0 mL/min. Method: conc. B, gradient 5!90% from 0 to 8 min,
90% isocratic from 8 to 13 min, gradient 90!5% from 13 to
15 min, 5% isocratic from 15 to 18 min. Compounds were detected
6
2
1
-[2-(Fluoromethyl)morpholino]hexan-1-amine (7): To a solution of
-{6-[2-(fluoromethyl)morpholino]hexyl}isoindoline-1,3-dione (6;
.2 g, 3.44 mmol, 1 equiv.) in ethanol (50 mL), hydrazine hydrate
at λ=254 nm, and target compounds were ꢁ95% pure.
(
1 mL, >5 equiv.) was added. The solution was heated to 85°C for
4
-Benzyl-2-(fluoromethyl)morpholine (4): In a flask, 2-(benzylamino)
4
h. Then the mixture was allowed to cool down to room
ethan-1-ol (3; 1.866 mL, 1.988 g, 13.15 mmol, 1 equiv.) and epifluor-
ohydrin (1 g, 13.15 mmol, 1 equiv.) were mixed together and stirred
for 3 h at room temperature. Then concentrated H SO (5 mL) was
temperature and the precipitate was filtered off. The filtrate was
evaporated to dryness under reduced pressure. The residue was
triturated with CH Cl , filtered, and the filtrate was evaporated
2
4
2
2
added carefully and the mixture was heated to 140°C for 1 h.
Afterwards, the reaction mixture was allowed to cool down to room
temperature and was poured onto ice. The aqueous layer was
basified with aqueous sodium hydroxide (10 M) and extracted with
three portions of ethyl acetate. The combined organic layers were
washed with water and brine, dried over sodium sulphate, filtered,
and evaporated to dryness under reduced pressure. The residue
was purified with flash column chromatography (petroleum ether/
ethyl acetate 3:1, Rf =0.35) to yield 4-benzyl-2-(fluoroethyl)
under reduced pressure to yield 6-[2-(fluoromethyl)morpholino]
hexan-1-amine (7; 577 mg, 2.64 mmol, 77%) as colorless oil without
further purification. H NMR (400 MHz, CDCl ): δ=4.48–4.42 (m, 1H),
1
3
3
.95–3.86 (m, 1H), 3.72–3.64 (m, 1H), 3.64–3.58 (m, 1H), 2.80–2.74
(m, 1H), 2.71–2.63 (m, 3H), 2.37–2.29 (m, 2H), 2.12 (td, J=11.5,
3
4
7
.4 Hz, 1H), 2.01–1.89 (m, 1H), 1.55–1.41 (m, 4H), 1.39–1.27 ppm (m,
1
3
H); C NMR (101 MHz, CDCl ): δ=85.0 (1 C), 83.3 (1 C), 74.4 (0.5 C),
3
4.2 (0.5 C), 67.0 (1 C), 59.1 (1 C), 54.2 (1 C), 54.1 (1 C), 53.1 (1 C),
1
42.2 (1 C), 33.7 (1 C), 27.4 (1 C), 26.9 (1 C), 26.6 ppm (1 C); MS (ESI):
morpholine (4; 1.31 g, 6.26 mmol, 48%) as colorless oil. H NMR
+
[M+H] calcd for C H FN OH=219.19; found 219.20.
11 23 2
(
400 MHz, CDCl ): δ=7.29–7.14 (m, 5H), 4.41–4.31 (m, 1H), 4.29–
3
4
.21 (m, 1H), 3.89–3.58 (m, 3H), 3.53–3.35 (m, 2H), 2.74–2.55 (m, 2H),
13
4
a
-Nitrophenyl-{6-[2-(fluoromethyl)morpholino]hexyl}-carbamate: To
solution of 6-[2-(fluoromethyl)morpholino]hexan-1-amine (7;
2
.14 (td, J=11.4, 3.3 Hz, 1H), 2.04–1.86 ppm (m, 1H); C NMR
(101 MHz, CDCl ): δ=137.7 (1 C), 129.3 (2 C), 128.5 (2 C), 127.4 (1 C),
3
500 mg, 2.29 mmol) in dry dichloromethane (10 mL), triethylamine
0.5 mL) and 4-nitrophenylchloroformiate (508 mg, 2.52 mmol)
8
5.0 (1 C), 83.3 (1 C), 74.5 (0.5 C), 74.3 (0.5 C), 66.9 (1 C), 63.5 (1 C),
(
+
53.9 (1 C), 53.8 (1 C), 53.0 ppm (1 C); MS (ESI): [M+H] calcd for
were added. The resulting solution was stirred for 2 h at room
temperature. Then the solvent was evaporated under reduced
pressure and the residue was purified by flash column chromatog-
raphy (CH Cl /MeOH 99:1, R =0.11) to yield 4-nitrophenyl {6-[2-
C H NOF=210.13, found 210.10.
1
2
16
2-(Fluoromethyl)morpholine hydroformiate (5): A solution of 4-
2
2
f
benzyl-2-(fluoromethyl)morpholine (4; 1.3 g, 6.21 mmol, 1 equiv.) in
MeOH (30 mL) was prepared and formic acid (0.5 mL) was added.
No precipitation was observed. Then palladium on activated
charcoal (10 wt/%, 130 mg) was added and the atmosphere was
replaced with hydrogen. The mixture was stirred for 1 h at room
temperature. After that, the catalyst was filtered off by a pad of
celite, which was washed with methanol. The filtrate was evapo-
rated to dryness in vacuo to yield 2-(fluoromethyl)morpholine
hydroformiate (5; 1.025 g, 6.21 mmol, quant.) as colorless oil.
NMR (400 MHz, CD OD): δ=8.37 (s, 1H), 4.57–4.49 (m, 1H), 4.44–
4
(
6
fluoromethyl)morpholino]hexyl}carbamate (588 mg, 1.53 mmol,
7%) as yellow oil. MS (ESI): [M+H] calcd for C H FN O =
18 26 3 5
+
3
84.20, found 384.05.
Due to high instability of the title compound only LCMS data was
measured, before directly reacting it in the next step.
1
3-Methyl-5,8,13,13a-tetrahydro-6H-isoquinolino[1,2-b]quinazolin-
1
10-yl-{6-[2-(fluoromethyl)morpholino]-hexyl}carbamate (2): To a sol-
ution of 4-nitrophenyl [6-(2-(fluoromethyl)morpholino)hexyl]
carbamate (86 mg, 0.23 mmol, 1.2 equiv.) and 13-methyl-5,8,13,13a-
H
3
.37 (m, 1H), 4.15–4.06 (m, 1H), 4.04–3.90 (m, 1H), 3.90–3.80 (m, 1H),
.39–3.32 (m, 1H), 3.29–3.26 (m, 1H), 3.25 (dt, J=2.5, 1.3 Hz, 1H),
tetrahydro-6H-isoquinolino[1,2-b]quinazolin-10-ol
(50 mg,
3
ChemMedChem 2021, 16, 1427–1437
1434
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